Medical Informatics Section : Self-Education Resources Project
Self-education resources were identified as an interest in the section's 1999
Continuing Education Needs Assessment. This list can be used for your professional
development, or as a handy resource handout for your informatics students. All
have linked literature searches from PubMed.
We are seeking contributers for several sections of this list, and additional areas of interest that are not listed here. Please contact the current MIS Professional Development Liaison, if you would like to help.
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Introduction to Medical Informatics
Tools
Applications
Areas of Medical Informatics
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WEBSITE: American Medical Informatics Association
http://www.amia.org/
The website of the American Medical Informatics Association contains information
about its publications and white papers in medical informatics, upcoming conferences,
working groups on more focused areas of interest; some areas available only
to AMIA members.
BOOK: Shortliffe, E.H. & Perreault, L.E. (Ed). Medical Informatics: Computer
Applications in Health Care and Biomedicine. 2nd ed. New York: Springer,
2001.
BOOK: van Bemmel, J.H., and M.A. Musen. Handbook of Medical Informatics.
New York: Springer, 1997.
A systematic overview for medical and health informatics with contents, exercises,
additional information on the web at http://www.mihandbook.stanford.edu/handbook/home.htm.
WEBSITE: Introduction to Medical Informatics
http://www.dbmi.columbia.edu/~hripcsa/textbook/
Online lecture notes from a course by Robert Jenders, Robert Sideli, George
Hripcsak, Department of Medical Informatics, Columbia University.
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WEBSITE: MLA CE Course Manual: Molecular Biology Information Resources
http://www.ncbi.nlm.nih.gov/Class/MLACourse/
This is the manual from Renata McCarthy's wonderful full day MLA CE course on
molecular biology information resources. It contains examples that make points
clear and features a special section on librarian roles in this rapid growth
field.
WEBSITE: NCBI Education Page
http://www.ncbi.nlm.nih.gov/Education/index.html
Online Education materials prepared by the National Center for Biotechnology
Information. Includes online tutorials for BLAST and some of the Entrez Databases
(PubMed, Nucleotides, Structures and OMIM).
JOURNAL ISSUE: Nucleic Acids Research Database Issue.
January 1 of each year.
Alphabetical version of database listing available at http://www3.oup.co.uk/nar/database/a/.
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WEBSITE: National Guideline ClearinghouseTM
http://www.guideline.gov/
The National Guideline ClearinghouseTM(NGC) is a public resource
for evidence-based clinical practice guidelines. NGC is sponsored by the Agency
for Health Care Policy and Research (AHCPR) in partnership with the American
Medical Association and the American Association of Health Plans. Includes an
electronic forum, NGC-L for exchanging information on clinical practice guidelines,
their development, implementation and use
BOOK: Institute of Medicine. (1990). Clinical Practice Guidelines: Directions
for a New Program. M.J. Field and K.N. Lohr (eds.) Washington, DC: National
Academy Press
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WEBSITE: HIPAA - The Health Insurance Portability and Accountability
Act of 1996
http://www.cms.hhs.gov/HIPAAGenInfo/
This page from the Centers for Medicare & Medicaid Services outlines the issues and discussion about HIPAA.
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WEBSITE: Wired for Health and Well-Being: the Emergence of Interactive
Health Communication
http://www.health.gov/scipich/pubs/finalreport.html
This excellent overall report on interactive health communication links to an
article on Consumers and evaluation of interactive health communication
applications.
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Kris Alpi, Samuel J. Wood Library, Weill Medical College of Cornell University
BOOK: Berner, E.S. Clinical Decision Support Systems : Theory and Practice.
New York: Springer Verlag, 1999.
The book includes chapters on the design, evaluation and application of decision
support systems, including the impact of practitioner and patient use of computer-based
diagnostic tools.
WEBSITE: Decision Analysis - Brief Selected Bibliography -
http://library.med.cornell.edu/Library/HTML/decisionbib.html
Prepared by Kristine Alpi, Weill Cornell Medical Library, to accompany a presentation
on Decision Analysis at the 2001 MLA Annual Meeting.
WEBSITE: The Field of Decision Analysis - Decision Analysis Society
http://faculty.fuqua.duke.edu/daweb/dafield.html
Site contains links to A Lexicon of Decision Making, References, Courses and
syllabi, Web-based decision aids, Journals, Software, Employment Opportunities,
and Research Opportunities.
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ARTICLE: Schleyer, T.K., Spallek, H. Dental Informatics: A Cornerstone of
the Modern Dental Practice. Journal of the American Dental Association
2001 May; 132(5): 605-13. PubMed
article abstract
BOOK: Abbey, L.M., Zimmerman, J.L. Dental Informatics: Integrating Technology
into the Dental Environment. New York: Springer Verlag, 1992.
WEBSITE: Dental Informatics Online Community
http://www.dentalinformatics.com/
The virtual, global community for anyone interested in Dental Informatics, funded by the National Library of Medicine.
WEBSITE: Dental Informatics WEBSITE – University of Michigan
http://www.dent.umich.edu/informatics/
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WEBSITE: D-Lib Forum
http://www.dlib.org
Includes the D-Lib magazine.
WEBSITE & DISCUSSION LIST: IFLANET - DIGITAL LIBRARIES: Resources
and Projects
http://www.ifla.org/II/diglib.html
The "DIGLIB mailing list" archive is available as well as a regularly updated
list of projects, conferences, and publications.
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Kris Alpi, Samuel J. Wood Library, Weill Medical College of Cornell University
ARTICLE: van Bemmel JH, Duisterhout JS. Education and training of medical
informatics in the medical curriculum. Int J Med Inf 1998 Jun;50(1-3):49-58.
PubMed
article abstract
WEBSITE: American Medical Informatics Association - Academic and Training Programs
http://www.amia.org/informatics/acad&training/
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BOOK: Dick, Richard S., Steen, Elaine B. and Don E. Detmer (Eds). The Computer-Based
Patient Record: An Essential Technology for Health Care, Revised Edition.
Washington, D.C.: National Academy Press, 1997.
Available online: http://books.nap.edu/catalog/5306.html
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BOOK: Goodman, Kenneth W. Ethics, computing and medicine: Informatics
and the transformation of health care. Cambridge University Press, 1998.
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BOOK: Friedman, Charles P. and Jeremy C. Wyatt. Evaluation Methods in
Medical Informatics. New York: Springer, 1997.
This book explains how to design, carry out, and interpret evaluations of information
technology in the context of health care organizations.
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BOOK: Collen, Morris F. A History of Medical Informatics in the United States,
1950 to 1990 Bethesda, MD: American Medical Informatics Association, 1995.
WEBSITE: History of Medical Informatics - American Medical Informatics Association
http://www.amia.org/history/index.html
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Nancy Gotcher, UT Southwestern Medical Center Library
WEBSITE: The Bare Bones Guide to HTML
http://werbach.com/barebones/
This site serves as an HTML reference guide that claims to list "every official
HTML tag in common usage". The guide is available in a variety of languages
and formats (html, text, zip) for online, downloaded and printed use. The author
also includes a list resources for Web creators.
WEBSITE: Adam's Advanced HTML Guide
http://www.geocities.com/SiliconValley/Orchard/5212/
Provides very clear, concise, and easy to understand lessons on advanced HTML.
Topics include tables, frames, meta-tags and more. Introductory lessons on Dynamic
HTML and Cascading Stylesheets are also available.
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Dick Miller, Lane Medical Library, Stanford University Medical Center
WEBSITE: Extensible Markup Language (XMLTM)
http://www.w3.org/XML/
ARTICLE: Bosak, Jon. XML and the second generation. Scientific American
1999 May; 280(5):89-93.
BOOK: Harold, Elliotte Rusty. XML: Extensible Markup Language. IDG
Books Worldwide, 1998.
Good overview and practical guide.
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Pam Murnane, Lane Medical Library, Stanford University Medical Center
WEBSITE: useit.com: Jakob Nielsen's WEBSITE
http://www.useit.com/
Find here the Alert Box, a bi-weekly column on web usability by Jakob Nielsen.
WEBSITE: Association for Computing Machinery(ACM) Special Interest
Group on Computer-Human Interaction
http://www.acm.org/sigchi/
Several local groups throughout the US and Internationally providing a forum
for discussion and education about the field of human-computer interaction (HCI).
BOOK: Norman, Donald A. The Design of Everyday Things. New York:
Currency/Doubleday, 1990.
A classic book on design, extends beyond computer usability.
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WEBSITE: The Visible Human Project
http://www.nlm.nih.gov/research/visible/visible_human.html
Take a look at AnatQuest, a browser and database of anatomical information from the project.
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Pam Murnane, Lane Medical Library, Stanford University Medical Center
WEBSITE: New Architect (formerly WebCoder.com)
http://webcoder.com/
Tutorials and sample scripts for JavaScript and DHTML. (From webreview.com)
WEBSITE: Webmonkey: JavaScript
http://hotwired.lycos.com/webmonkey/programming/javascript/
There is a *great* JavaScript tutorial (long but good, you can use the index
to find snippets of how-to's) and code library.
BOOK: Anuff, Ed. Java Sourcebook. New York: J. Wiley and Sons, 1996
Solid introduction for beginners, includes samples, tutorials, commands and
syntax. [about the Java language, not Java script]
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PAPER: Butler, Yvonne (Ernst & Young), Knowledge management -
if only you knew what you knew
http://conferences.alia.org.au/shllc1999/papers/butler.html
An interesting paper from the 8th Asia-Pacific Specials, Health and Law Librarians
Conference on the nature of knowledge management. It provides a framework for
definition of knowledge management and uses client examples to illustrate the
issues.
WEBSITE: Knowledge Management Magazine (Online)
http://www.kmmag.com/
Published on a monthly basis, this online KM magazine provides a number
of useful articles focusing on basic business strategy, organizational culture,
and technological solutions to KM problems. A free subscription to a print version
of the magazine is available to business and IT executices working on KM initiatives.
-- John A. Hermans, Library Journal, September 1, 1999, p.163.
WEBSITE: Knowledge Management WWW Virtual Library
http://www.brint.com/km/
Maintained by @Brint, an online resource library and information exchange
network for business and technology issues, this is perhaps the largest collection
of KM sources on the web. Materials range from basic white papers to online
discussion forums, a calendar of events, a bookstore, and a KM bibliography.
-- John A. Hermans, Library Journal, September 1, 1999, p.163.
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ARTICLE: Friedman C, Hripcsak G. Natural language processing and its future
in medicine. Academic Medicine 1999 Aug; 74(8) 890-5. PubMed
article abstract
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WEBSITE: Neuroinformatics: The Human Brain Project
http://www.nimh.nih.gov/neuroinformatics/index.cfm
The Human Brain Project is supported by the National Institute of Mental Health.
Links to the Archives of the Neuroinformatics Interest Group as well as Conferences,
Research Grants and Related Servers.
WEBSITE: Neuroinformatics Workbench: USC Brain Project
http://www-hbp.usc.edu/workbench.html
From the site: The 'Neuroinformatics Workbench' is a set of tools being
constructed by the USC Brain Project to facilitate development of neuroscience
databases and the integration of theory and experiment in neuroscience. The
NeuroInformatics Workbench is currently in an early stage of development...
Read about NeuroScholar, a Knowledge-Management
system for published neuroscientific information.
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Roxanne M. Nelson, RN, MSLIS, Medical Library, Mercer University School
of Medicine
WEBSITE: American Nursing Informatics Association
http://www.ania.org
California-based professional organization for informatics nurses; job board,
meeting information, educational opportunities, links to additional nursing
and informatics organizations.
WEBSITE: American Medical Informatics Association/Nursing Informatics
Work Group
http://www.amia.org/mbrcenter/wg/ni/
Stresses the interests of nursing informatics within the larger context of health
informatics. Extensive conference information, links to informatics sites, educational
resources; some areas available only to NIWG members, including newsletter,
meeting minutes, job opportunities.
BOOK: Hannah, Kathryn J., Marion J. Ball and Margaret J.A. Edwards. Introduction
to Nursing Informatics. 2nd Ed. New York: Springer-Verlag, 1999.
Introductory text aimed at undergraduates, administrators, and clinical nursing
staff which addresses terms and concepts central to a basic understanding of
the field.
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BOOK: Lorenzi, N., Riley, R.T., Ball, M.J., Douglas, J.V. (Eds.). Transforming
Health Care Through Information. New York: Springer-Verlag, 1995.
This book illustrates the complex challenges which health service organizations
face in implementing technology changes.
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ARTICLE: Bader SA, Braude RM. "Patient informatics": creating new partnerships
in medical decision making. Academic Medicine 1998 Apr;73(4):408-11.
PubMed
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ARTICLE: Lewis D. Computer-based approaches to patient education: a review
of the literature. Journal of the American Medical Informatics Association
1999 Jul-Aug;6(4):272-82. PubMed
article abstract
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Kris Alpi, Samuel J. Wood Library, Weill Medical College of Cornell University
JOURNAL ISSUE: Accessing Useful Information: Challenges in Health
Policy and Public Health.
Proceedings of a national forum. March 23, 1998. Journal of Urban Health
1998 Dec;75(4)
Presentations from the forum are available at http://www.nlm.nih.gov/nichsr/nyam/nyam.html.
BOOK: Perrin, Edward B.; Durch, Jane S.; Skillman, Susan M. (Eds.); Panel
on Performance Measures and Data for Public Health Performance Partnership Grants,
National Research Council. Health Performance Measurement in the Public
Sector: Principles and Policies for Implementing an Information Network.
Washington, D.C.: National Academy Press, 1999.
Available online: http://books.nap.edu/catalog/6487.html
WEBSITE: Public Health Informatics Resources
http://www.phha.mlanet.org/activities/phi.html
Carolyn Bridgewater, Louisiana State University, and Kristine Alpi maintain
this list of PHI resources including links to PHI in practice, organizations,
educational opportunities and publications.
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WEBSITE: eICD ICD-9-CM Lookup Page
http://www.eicd.com/EICDMain.htm
A commercial site provided by eICD.com that allows ICD-9-CM lookups online.
WEBSITE: Health Level 7
http://www.hl7.org/
WEBSITE: LOINC
http://www.regenstrief.org/loinc/
Logical Observation Identifiers Names and Codes (LOINC) provides a standard
set of universal names and codes for identifying individual laboratory results,
clinical observations and diagnostic study observations.
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BOOK: Field, Marilyn J. (Ed.). Telemedicine: A Guide to Assessing Telecommunications
for Health Care. Washington, D.C.: National Academy Press, 1996.
Available online: http://www.nap.edu/catalog/5296.html
"A general, relatively nontechnical, but thorough overview of the assessment of
telemedicine technology." Booklist
WEBSITE: NLM National Telemedicine Initiative
http://www.nlm.nih.gov/research/telemedinit.html
Information about NLM and other government funded Telemedicine projects. Links
to other useful websites.
WEBSITE: Telemedicine Information Exchange (TIE)
http://tie.telemed.org/
The TIE provides an all-inclusive platform without bias for information on telemedicine.
The Telemedicine Information Exchange was created and is maintained by the Telemedicine
Research Center with major support from the National Library of Medicine.
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Kris Alpi, Samuel J. Wood Library, Weill Medical College of Cornell University
WEBSITE: Association for Veterinary Informatics
http://www.avinformatics.org/
This site connects users with all sorts of veterinary informatics resources
including the AVI-L(VETINFO) Veterinary Informatics Mailing List, the AVI newsletters
(through 1998), and the link collection on the Veterinary Informatics Resources
page.
ARTICLE: Smith RD, Williams, M. Applications of informatics in veterinary
medicine. Bulletin of the Medical Library Association 2000 Jan; 88(1):
49-55. BMLA
PubMed Central Full-Text Article.
ARTICLE: Talbot RB. Veterinary medical informatics. Journal of the American
Veterinary Medical Association 1991 July 1; 199(1): 52-71.
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WEBSITE: CENDI Projects - Taxonomies, terminologies and controlled vocabularies
http://www.cendi.gov/proj_cont_vocab.html
WEBSITE: Fact Sheet: UMLS ® Metathesaurus ®
http://www.nlm.nih.gov/pubs/factsheets/umlsmeta.html
WEBSITE: MeSH Staff Presentations and Publications
http://www.nlm.nih.gov/mesh/staffpubs.html
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Pam Murnane, Lane Medical Library, Stanford University Medical Center
WEBSITE: webmonkey: The Web Developer's Resource
http://www.hotwired.com/webmonkey/
From Wired Digital, a starting point for tutorials and sample scripts in Java,
JavaScript, Perl, XML, databases, and more. Also good for maintaining current
awareness regarding emerging web technologies. Includes a section on browser
compatibility.
BOOK: Siegel, David. Creating Killer WEBSITEs. Second Ed. Indianapolis,
IN: HaydenBooks, 1997
An overview of design on the web, some HTML and tool tips. Excellent for planning
and designing stage. (see also http://www.killersites.com/)
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Updated: 7 March 2006
Page created by Kris Alpi
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copyright © 2004,2007 Medical Informatics Section, Medical Library Association
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